Morphological characterization of the human corneal epithelium by in vivo confocal laser scanning microscopy
Introduction
Modern ophthalmology evolved during the last decades from descriptive slit lamp-based findings to in vivo monitoring on the cellular level. During the past decades imaging technologies such as optical coherence tomography (OCT) became essential for the noninvasive in vivo diagnostics of the living eye—especially for the retinal diagnostics. Addressing the anterior segment (AS) of the eye, the AS-OCT technology enables quantitative as well as qualitative imaging including the cornea, limbus, anterior chamber and angle without the use of topical anesthesia (1). Based on advanced laser and spectrometer technologies during the past years, the axial resolution of OCT has been dramatically increased and thickness measurements of single corneal layers are available by ultrahigh-resolution OCT (2,3) as well as visualization of cellular and sub-cellular structures by spectral domain OCT (4). While OCT is very promising for corneal cross-sectional imaging, confocal laser scanning microscopy (CLSM) offers en-face imaging with high optical resolution and depth discrimination at the cellular level (1). Due to its axial resolution, selective intracorneal as well as intraepithelial sectioning can be achieved, and the different corneal epithelial cell-types can be distinguished (5). CLSM is suited for monitoring of the living cornea in its physiological state (6) permitting longitudinal examinations of the same cornea in normal and pathological conditions covering the entire ocular surface including the cornea, bulbar and palpebral conjunctiva and lids (1,7,8).
In general there is a number of CLSM based applications for the corneal diagnostic covering a broad range of applications including corneal nerve degeneration and regeneration, chirurgical interventions, contact lenses, diabetes mellitus (DM), keratoconus, keratomycosis, and ocular surface diseases (OSD) (1,8). The evaluation of the subbasal nerve plexus (SNP) of the cornea might add value to the diagnosis of a variety of diseases including limbal stem cell deficiency (LSCD), DM and infection (1). Until today, many studies have aimed in establishing of morphometric features of the SNP as a sensitive marker for ocular and systemic disorders (9,10).
Regarding OSDs, the cellular characterization of the corneal epithelial cell morphology is becoming increasingly important and recent studies have focused on understanding the microstructure of the epithelial cell layers in the cornea (11-13). Besides OSDs, in LSCD for example, a positive correlation between the reduction of basal cell density and the severity of LSCD was reported and basal cell density could be used as a parameter to measure limbal stem cell function at the early stages of the disease process (14,15). In DM, alterations in corneal innervation and basal cell density were reported and it could be demonstrated that reduced basal cell density correlated with changes in innervation (16).
Given the importance of understanding cellular changes in ophthalmological disorders such as OSDs or cellular changes that occur as secondary effects of diseases or treatment regimens, a CLSM-based 3D imaging and automated quantification pipeline could represent a powerful non-invasive tool providing valuable diagnostic information. CLSM has the ability to resolve structural and functional interrelationships, both temporally and spatially in the cornea. Cellular details of biological processes such as inflammation, wound healing, toxicity, and disease could be evaluated over time and help in the design of therapeutic strategies and the assessment of treatment effectivity.
The present study addresses the growing interest in quantitative data of the corneal epithelium and follows up on our initial study (13) that used 3D scanning techniques with fewer capabilities and required OCT data for epithelial thickness determination. The aim was to demonstrate a CLSM-based 3D in vivo image processing pipeline and an automated software for the morphological characterization and quantification of the different epithelial cell layers of the human corneal epithelium.
Methods
Confocal microscopy and volume data acquisition
To perform 3D in vivo CLSM, the Heidelberg Retina Tomograph II (HRTII, Heidelberg Engineering GmbH, Heidelberg, Germany) in combination with a modified version of the Rostock Cornea Module (RCM)—RCM 2.0—was used (RCM, Heidelberg Engineering GmbH, Heidelberg, Germany), see Figure 1. The in-house developed modified version of the RCM was previously presented as RCM 2.0 (12). There, the RCM was equipped with a piezo actuator with a closed-loop travel range of 500 µm (MIPOS 600 SG OEM, piezosystem jena GmbH, Jena, Germany). This actuator PAObjective moves a water immersion objective lens (Zeiss, Jena, Germany; 63 x/0.95 w, 670 nm, ∞/0) and enables a precise focus control. Additionally, the present study introduces a second piezo actuator PATomoCap (SLC-1720-020-W-L; SmarAct GmbH, Oldenburg, Germany) to control the position of a contact element (TomoCap; Heidelberg Engineering, Heidelberg, Germany) during measurement. This allows the TomoCap to be moved in a controlled manner while in contact with the cornea in order to set the optimal starting focus position for achieving the largest possible height of the cornea stack and to minimize patient’s examination time. As suggested in (12), a modified TomoCap is used to reduce lateral eye movements and applanation artifacts. The modified TomoCap has a concave surface with a diameter of 10 mm and a curvature radius of 7.8 mm, corresponding to the curvature of an average human cornea, thus creating a form closure with the cornea surface during in vivo CLSM (12).
The study included 25 volunteers (average age 44 years, ranging from 25 to 62 years) with normal corneas for investigation by in vivo CLSM. Exclusion criteria were: contact lens wear, keratoconus, and any corneal surgeries in the past. Refraction error was not considered. In accordance with the Declaration of Helsinki, this study was conducted and explained in detail to all volunteers. Informed consent was obtained prior to conducting any investigative procedures.
A carbomer gel (Vidisic; Bausch & Lomb/Dr. Mann Pharma, Berlin, Germany) was used as the immersion medium. It was inserted between the objective lens and the TomoCap as well as between the TomoCap and the cornea. Before the immersion gel was applied to the cornea, a drop of topical anesthetic (Proparakain-POS; Ursapharm, Saarbrücken, Germany) was instilled. The immersion gel minimizes back reflections from interfaces, enables the high numerical aperture of the objective lens and thus improves the image quality.
The scans were performed in the central cornea and in both eyes of the respective test person. To acquire full-thickness volume data sets of the epithelium, we utilized the PATomoCap to position the TomoCap so that the initial focus was slightly outside the cornea. Then, with the PAObjective, the image focus was moved at a constant speed of 30 µm/s through the entire epithelium. During this through-focusing, the HRT acquired the images with 30 frames per second. The field of view of the images was 350 µm × 350 µm at 384 × 384 pixels. This resulted in a voxel resolution of 0.91 µm × 0.91 µm × 1 µm per voxel.
Image registration
It is well-known that during the fixation of a stationary target, the human eyes are continuously affected by small involuntary movements, commonly categorized as microsaccades, ocular drifts and ocular microtremors (17,18), ordered by decreasing amplitude. Because of the point-wise scanning of CLSM, these movements cause characteristic image distortion (13,19). The high-velocity microsaccades in particular lead to significant deformation of the cell shapes in the affected image data. Even though the curved contact cap effectively attenuates the eye movements, clearly visible motion artifacts are still present. In order to avoid adverse effects on cell characterization, the same motion-compensating image registration algorithm is used as in the previous study (13). The motion-corrected and aligned image frames are finally stacked to create a nearly isotropic volume representation.
Reconstruction of epithelium, automatic cell segmentation and quantification
Further image processing and analysis were performed using Mathematica (Version 12.0, Wolfram Research Inc., Champaign, IL, USA). Figure 2 shows a schematic overview of the applied methods. Global brightness equalization was performed on all stack images to compensate varying image illumination (“vignette effect”). Equalized image stacks were smoothed with a 3×3×3 pixel wide 3D Gaussian filter (σ=1.5) to enhance transitions of cell membranes between adjacent volume slices. For each image slice, image noise was removed and local structural coherence of membranes (and other present structures) was amplified by using a ridge-detecting image filter (“RidgeFilter”, σ=1). A bandpass filter for epithelial membrane detection was empirically designed (“BandpassFilter”, cutoff frequencies of 0.28 and 1, filter kernel with a width of 62 pixels) and applied to all preprocessed images. This filter attenuates low (e.g., illumination gradients) and high (e.g., image noise) image frequencies while leaving the mid-range image frequencies (i.e., membranes and structures similar in diameter) unchanged. For each image stack, per pixel bandpass filter responses were summarized for individual images and normalized to respective image sizes. Resulting curves of depth-depending detection values were smoothed with a 3 pixel wide 1D mean filter and an empirically determined threshold value of 0.035 (representing images with still recognizable membranes) was applied to each curve to identify images from the epithelium of the respective image stack. Structure segmentation of all identified epithelial images was performed by local adaptive binarization (5×5 pixel wide window) and small artifacts were removed. Resulting binary images were inverted and a watershed transformation was performed for cell detection. Due to the vignette effect inherent to CLSM images of the cornea, contrast and visibility of the imaged cells decrease significantly towards the image borders. This property results in a loss of cell detection quality with increasing distance from image centers. Therefore, a central circular area with a diameter of 250 pixels (corresponding to almost 0.041 mm2) was defined around image centers and all cells outside this area were excluded from further processing and analysis.
Cross-sections of all detected epithelial cells were quantified and measurements were averaged for each image slice. Quantities included cell density (cells/mm2), cell area (µm2) and cell diameter (µm). Polygonality (sides) of cells was calculated by approximating polygons to cell shapes using a modified Ramer-Douglas-Peucker algorithm (20,21). The neighborhood count (n) was calculated based on the number of adjacent neighbors of each cell. Finally, cell patterns were analyzed based on the Clark-Evans aggregation index (CE-Index) (22).
For each parameter analyzed, data were separated by age group and functions were fitted within the defined intervals. Detailed ratios of neighborhood count and polygonality of cells across the defined interval were visualized in the form of stacked bar charts.
Results
Volume data acquisition, image registration
CLSM imaging with RCM 2.0 using two dedicated piezo stages enabled successful full-thickness volume data collection of the epithelium. Furthermore, the attenuation of the eye movements by the concave TomoCap led to registered image stacks with an increased lateral coverage. The median of the area projected into the x-y-plane, in which all registered images of a stack contain information was 45,723 µm2 (min: 27,253 µm2, max: 47,794 µm2). Additionally, the integrated PATomoCap accelerated the entire acquisition procedure by simplifying the adjustment of this cap prior to the start of the acquisition process.
All scans were manually checked for the presence of superficial cells (SCs) and the SNP, for contrast and the signal-to-noise ratio. In total 43 scans of 25 volunteers were used for the following segmentation and quantification procedures. The presence of SCs and the SNP allowed a definition of a normalized depth scale ranging from 0 to 1 (first SC =0, SNP =1) from anterior to posterior. Thereby the comparison of corresponding epithelial cell layers between the data sets independent of the actual epithelial thickness was possible. For the evaluation of a possible age dependency, the 25 volunteers were divided into three age groups: Group 1: 20–35 years (n=10); group 2: 36–55 years (n=9) and group 3: 56–70 (n=6).
Reconstruction of the corneal epithelium
The 3D reconstruction and segmentation of the corneal epithelial cell layers was performed for all scans (Figure 3). Visual inspection of the image registration results revealed good alignment performance with no visible errors in the regions from the SNP through the basal and intermediate epithelium. Several visible distortion artifacts, mainly caused by overexposed regions, were found in a few superficial images. Individual characteristic cell layers including superficial, upper wing, lower wing-, and basal cells could be reconstructed in 3D (Figure 3B). The developed automatic segmentation algorithm did not work efficiently for superficial and deeper regions of basal cells. Therefore, manual segmentation for one scan was performed to visualize the extreme changes in morphology from anterior (SCs) to posterior (basal cells). Thereby, the mean cell areas ranged from 1,121.8 to 57.2 µm2 and mean cell diameters ranged from 39.5 to 8.9 µm (Figure 3C).
Automated segmentation and quantification
Figure 4 shows an overview of the data collected for the study and used for quantification. Because of individual differences of the epithelial thickness, the interslice distance varied between the datasets when expressed in normalized depth coordinates. Depth dependent cell characteristics could be exemplified for all analyzed scans (Figure 5). The segmentation algorithm worked reliably within the upper and lower wing cell area covering 70–95% of the available image sections, while the percentage of available image data went down within superficial and basal cell area (Figure 5A).
Segmented cells were color-coded depending on the number of surrounding neighbors (Figure 5D) and the polygonality (Figure 5E). Depending on the depth from anterior to posterior, changes of the color-patterns could be observed (Figure 5D,E). The corresponding values are summarized in Figure 5F. Depth depending changes were present in the number of surrounding neighbors and the polygonality showing different morphological characteristics.
Repeatability of measurements
In advance of the study, we have performed repeated scans of volunteers and analyzed the data respectively. An averaged coefficient of variation was determined. In order to exemplify the error range, four independent depth scans of one volunteer were performed and used for automated segmentation, quantification and analysis of variation. The mean coefficient of variation was found for each parameter using the data of successful segmented areas: cell density 0.040; cell area 0.045; cell diameter 0.022; CE-Index 0.005; neighbor count 0.005; polygonality count 0.004.
Generation of normative data
Figure 6 shows the analyzed quantities for the respective parameters (column A: total mean values; column B: age-dependent mean values). In Table 1 the analyzed parameters and in Table 2 total mean values are listed.
Full table
Full table
The neighborhood and polygonality parameters were additionally evaluated according to their percentage of distribution from anterior to posterior for all analyzed scans (Figure 7). Depth-dependent changes in the number of neighbors and the polygonality of cells were detected confirming the morphological characteristics within the different layers of the corneal epithelium.
Conclusions
The morphological characterization and quantification as well as the understanding of the proliferative and differentiation behavior of the different corneal epithelial cell layers is of clinical relevance as changes affecting corneal cells and nerves are not only characteristic for unified corneal pathologies but also reflect non-specific pathological processes present in many diseases.
Anatomically, the healthy human corneal epithelium consists of five to six layers of nucleated cells which were categorized into SCs, intermediate cells and basal cells according to their functionality and morphology. During both, homeostasis and wound healing, the corneal epithelium is in a constant state of self-renewing and a complete turnover occurs in approx. 5 to 7 days. The epithelium is thereby maintained by basal cells which are the source of wing and SCs and a delicate balance of shedding followed by proliferation is critical in maintaining a smooth and uniform epithelial surface (24).
SCs are characterized by a polygonal cell pattern, bright illuminated cytoplasm, reflecting nuclei and perinuclear dark halo (25) and appear brighter in CLSM images than cells towards the posterior of the cornea (26). About 1/7 of these cells are lost by desquamation within 24 hrs with a precedent change in their optical characteristics (25) with the darker ones being those about to desquamate from the surface (27). The intermediate layer is composed of wing cells. These cells form a regular mosaic of cells with sharp and reflecting cell borders showing the same reflectivity as SCs (8,28). However, their cell nuclei are not well defined and the cytoplasm appears dark (24). They are smaller in size when compared to SCs but more regular in form, and they can be further subdivided according to their position into upper and lower wing cells, with the latter being smaller. The innermost part of the epithelium is formed by a monolayer of basal cells. These cells show the smallest diameter when compared to the layers above and have a cylindrical, columnar form (25,28). They display a uniformly bright cell border with dark cytoplasmic mass (27). Besides stem cells and transient amplifying cells, they are the only corneal epithelial cells capable of mitosis (29). During the renewing process of the corneal epithelium, the basal cells differentiate and migrate vertically towards the anterior surface to repopulate the cornea (30).
The present study represents a further development of a fully automated software tool for epithelial cell quantification. Compared to our former publication (13), the detection of epithelial cells was improved due to global brightness equalization and local structural contrast amplification in combination with bandpass-based membrane detection. The segmentation results reveal that efforts for further improvements on cell segmentation should be focused at the challenging regions of the superficial and deep sections of basal cells in order to provide automated cell characterization for the entire extent of the corneal epithelium. In addition to the cell features examined in the previous study (13), we have also introduced new parameters including density, aggregation (CE-Index), the count of surrounding cells and the polygonality of cells.
The mean cell densities gradually increased from anterior to posterior corresponding to the above-mentioned characteristics of the three different cell zones of the epithelium. Starting from the surface with the SCs and moving towards to the SNP, the cell morphology changes in size and shape from large but flat polygonal cells (SCs) to thin but long cylindrical cells (basal cells) and consequently their density in cross-sections increases. Comparison of our results with Eckard et al. (26) showed a general agreement regarding intermediate and basal cell layers. It must be mentioned that in our study the algorithm did not work sufficiently for SCs and the lowest parts of the basal cells located directly above the Bowman’s membrane where the highest density is expected (8,25). Regarding cell area, Prakasam et al. (13) reported a linear decrease from anterior to posterior which could be confirmed in this study while similarities and differences with other studies have already been discussed there. The minimal differences within the basal cell area were probably caused by the fact, that in the former evaluation the membranes were segmented comparatively thicker due to lower image quality and thus the minimum size was slightly lower.
The comparison of the herein performed manual count vs. the segmentation algorithm showed similar values in the depth range between 27 and 47 µm of the analyzed scan representing the wing cell area and the upper part of the basal cells. Furthermore, the manually determined values were in accordance with other published works like by Gaujoux et al. (11).
The analyzed mean cell diameters showed a gradual decrease from anterior to posterior thereby showing comparable results to our previous study (13). When the herein performed manual count is compared with the segmentation algorithm, the values are comparable within the wing cells and could show comparable trends to former studies as well (13,25,31).
The analyzed CE-Index showed a gradual increase from anterior to posterior displaying a regular distribution of the cells. In future studies, it would be important to evaluate whether this parameter also changes in pathologies of the corneal epithelium.
Regarding the number of neighbors surrounding a cell, the analysis demonstrated depth-dependent changes. In the majority, cells were surrounded by either 5 or 6 neighbors and fluctuations were detected in the front part and further downstream from point 0.75 towards 1 within the normalized depth. The variations in the anterior section may have been caused by the limited data available while the percentage of available image data within middle and posterior section accounted for between 40% to 90%. It appears that there was a structural change in the section 0.75 of the normalized depth, i.e., the transition from lower wing cells to basal cells.
The polygonality of cells decreased from anterior to posterior confirming the previously described characteristic of the epithelial cell shapes changing from polygonal to cylindrical cells. The predominant shape of the cells was pentagonal with the relative amount decreasing towards the SNP. The second-most dominant shape was represented by quadrangular cells. Here the percentage remained stable at 30% while after section 0.75 of the normalized depth the relative amount rose to a maximum of 45% indicating the transition zone between lower wing cells and basal cells. However, it must be considered that SCs are the only cells that can be displayed in their entirety. In contrast, wing cells are arranged like roof tiles and with only part of their cell surface accessible in one section, thus influencing the analysis of all the above-mentioned parameters. Nevertheless, within this study we were able to present normative data for future comparison with data analyzed in pathologies of the corneal epithelium.
We have divided our subjects into three age groups whereas no age dependency was found. However, there are studies reporting age dependency in the human cornea. Zheng et al. examined 80 subjects and found age-related changes in peripheral basal epithelial cell density and in peripheral basal endothelial cell density. It must be mentioned that a significance was only found within the youngest age group (32). Gambato et al. (33) reported an increase in cell diameter of superficial epithelial cells with subject age while basal epithelium and the SNP did not change depending on age in the 108 subjects studied (33). On the other hand, based on a study with 45 subjects, Mustonen et al. (34) reported no statistically significant correlation between superficial and basal epithelial cell density or age. Furthermore, no statistically significant differences in cell densities or cell areas of any corneal layer between gender nor between left or right eyes were reported (34). Eckard et al. (26) reported no statistically significant relationship between cell densities and age, sex or refraction as well in 68 subjects examined. In summary, all these studies mentioned above show controversial results.
It should be considered that our number of analyzed subjects was smaller when compared with all of the above-mentioned studies. The question of whether a larger number of test persons examined further increases the significance of the normative data cannot be answered unequivocally. On the one hand, it can be assumed that an increased number of subjects improves the significance, but on the other, we postulate that newly determined quantities would be within the already determined quantity ranges. From our point of view, it is imperative to first improve the imaging strategy and the cell segmentation tools for superficial and deeper basal cell sections and then, in a second step, to increase the size of the normative cohort with these improved tools. However, the segmentation of SCs requires completely different tools that have yet to be developed.
As an outlook to possible future algorithmic developments, the 3D reconstructions could be potentially used for 3D characterization by volumetric cell features. However, even though the 3D reconstruction process achieves good structural coherence between adjacent images, the anisotropic optical resolution of the CLSM volumes presents a challenge for the segmentation and quantification algorithms. We have an almost isotropic voxel resolution of 0.91 µm × 0.91 µm × 1 µm per voxel, but the optical resolution differs significantly between the z-direction (about 4 µm) and the en-face directions (about 1 µm) (35). Due to this, a reliable 3D segmentation and quantification of epithelial cells based on current data was not feasible.
This in vivo study demonstrates a CLSM-based imaging pipeline for cellular characterization of the human corneal epithelium. The concave contact cap and the integration of a second, large travel-range piezo actuator significantly improved the usability of this method. Furthermore, characteristic quantities of different epithelial cell layers were presented, whereas no age dependency was found. Given the growing interest and the importance of understanding the cellular changes in ophthalmological disorders or disorders which were described to affect cornea’s morphology as well, a non-invasive in vivo CLSM-based imaging and quantification pipeline could serve as a powerful diagnostic tool and thereby improve the evaluation of therapeutic regimens. Changes in the herein analyzed parameters could be evaluated over longer periods of time and help in the understanding of underlying biological processes such as inflammation and wound healing. Moreover, longitudinal analyses of these parameters could help in the assessment of treatment efficacy and regeneration of the cornea. The data gained herein could serve as a first step to generate more normative epithelial data towards further investigations. Further significant effort is necessary to improve the algorithm for superficial and basal cell segmentation.
Acknowledgments
Funding: Parts of this work were supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – grant numbers STA 543/6-2 and KO 5003/1-2 – and by the German Federal Ministry of Education and Research (Antifibrotix, 03VP06230; RESPONSE “Partnership for Innovation in Implant Technology”).
Footnote
Conflicts of Interest: All authors have completed the ICMJE uniform disclosure form (available at http://dx.doi.org/10.21037/qims-20-1052). Dr. KAS reports grants from German Federal Ministry of Education and Research, during the conduct of the study; Dr. KS reports grants from Deutsche Forschungsgemeinschaft (DFG, German Research Foundation), during the conduct of the study; Dr. TS reports grants from German Federal Ministry of Education and Research, during the conduct of the study; Dr. SA reports grants from Deutsche Forschungsgemeinschaft (DFG, German Research Foundation), during the conduct of the study; Dr. BK reports grants from Deutsche Forschungsgemeinschaft (DFG, German Research Foundation), during the conduct of the study; SB reports grants from Deutsche Forschungsgemeinschaft (DFG, German Research Foundation), during the conduct of the study. The other authors have no conflicts of interest to declare.
Ethical Statement: The study protocol was approved by the Institutional Review Board [Rostock University Medical Center Ethics Committee, Registration number: A 2018-0162 (dated 23 August 2018)]. All study procedures followed the tenets of the Declaration of Helsinki, and informed consent was obtained from all subjects before enrollment.
Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/.
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