Assessment of ultrashort echo time (UTE) T2* mapping at 3T for the whole knee: repeatability, the effects of fat suppression, and knee position
Original Article

Assessment of ultrashort echo time (UTE) T2* mapping at 3T for the whole knee: repeatability, the effects of fat suppression, and knee position

Zhenzhou Wu1,2#, William Zaylor1,2#^, Stefan Sommer3,4, Dongxing Xie1,2, Xiaodong Zhong5, Kecheng Liu6, Jeehun Kim1,2, Jillian E. Beveridge1, Xiaoliang Zhang7, Xiaojuan Li1,2,8

1Program of Advanced Musculoskeletal Imaging (PAMI), Cleveland Clinic, Cleveland, OH, USA; 2Department of Biomedical Engineering, Cleveland Clinic, Cleveland, OH, USA; 3Advanced Clinical Imaging Technology (ACIT), Siemens Healthineers International AG, Zurich and Lausanne, Switzerland; 4Swiss Center for Musculoskeletal Imaging (SCMI), Balgrist Campus, Zurich, Switzerland; 5Siemens Medical Solutions USA, Inc., Los Angeles, CA, USA; 6Siemens Medical Solutions USA, Inc., Malvern, PA, USA; 7Department of Biomedical Engineering, University at Buffalo, State University of New York, Buffalo, NY, USA; 8Department of Diagnostic Radiology, Cleveland Clinic, Cleveland, OH, USA

Contributions: (I) Conception and design: X Li; (II) Administrative support: X Li, JE Beveridge, K Liu; (III) Provision of study materials or patients: Z Wu, S Sommer; (IV) Collection and assembly of data: Z Wu, W Zaylor, D Xie, J Kim; (V) Data analysis and interpretation: Z Wu, W Zaylor, S Sommer, JE Beveridge, X Li; (VI) Manuscript writing: All authors; (VII) Final approval of manuscript: All authors.

#These authors contributed equally to this work as co-first authors.

^ORCID: 0000-0002-2463-226X.

Correspondence to: Xiaojuan Li, PhD. Department of Biomedical Engineering, Cleveland Clinic, Cleveland, OH, USA; Department of Diagnostic Radiology, Cleveland Clinic, Cleveland, OH, USA; Program of Advanced Musculoskeletal Imaging (PAMI), Cleveland Clinic, 9500 Euclid Ave, Cleveland, OH 44196, USA. Email: lix6@ccf.org.

Background: Knee tissues such as tendon, ligament and meniscus have short T2* relaxation times and tend to show little to no signal in conventional magnetic resonance acquisitions. An ultrashort echo time (UTE) technique offers a unique tool to probe fast-decaying signals in these tissues. Clinically relevant factors should be evaluated to quantify the sensitivity needed to distinguish diseased from control tissues. Therefore, the objectives of this study were to (I) quantify the repeatability of UTE-T2* relaxation time values, and (II) evaluate the effects of fat suppression and (III) knee positioning on UTE-T2* relaxation time quantification.

Methods: A dual-echo, three-dimensional center-out radially sampling UTE and conventional gradient echo sequences were utilized to image gadolinium phantoms, one ex-vivo specimen, and five in-vivo subjects on a clinical 3T scanner. Scan-rescan images from the phantom and in-vivo experiments were used to evaluate the repeatability of T2* relaxation time values. Fat suppressed and non-suppressed images were acquired for phantoms and the ex-vivo specimen to evaluate the effect of fat suppression on T2* relaxation time quantifications. The effect of knee positioning was evaluated by imaging in-vivo subjects in extended and flexed positions within the knee coil and comparing T2* relaxation times quantified from tissues in each position.

Results: Phantom and in-vivo measurements demonstrated repeatable T2* mapping, where the percent difference between T2* relaxation time quantified from scan-rescan images was less than 8% for the phantom and knee tissues. The coefficient of variation across fat suppressed and non-suppressed images was less than 5% for the phantoms and ex-vivo knee tissues, showing that fat suppression had a minimal effect on T2* relaxation time quantification. Knee position introduced variability to T2* quantification of the anterior cruciate ligament, posterior cruciate ligament, and patellar tendon, with percent differences exceeding 20%, but the meniscus showed a percent difference less than 10%.

Conclusions: The 3D radial UTE sequence presented in this study could potentially be used to detect clinically relevant changes in mean T2* relaxation time, however, reproducibility of these values is impacted by knee position consistency between scans.

Keywords: Magnetic resonance imaging (MR imaging); ultrashort echo time (UTE); knee imaging; knee position; fat suppression


Submitted Feb 06, 2023. Accepted for publication Oct 07, 2023. Published online Nov 22, 2023.

doi: 10.21037/qims-23-459


Introduction

Ligaments, tendons, and menisci are connective tissues in the knee which impact the symptoms and outcomes of knee disorders such as osteoarthritis (OA) (1-3). The menisci are vital for proper knee function and protection of the articular cartilage, and ligaments and tendons contribute to joint stability (4,5). Previous studies reported that elevated T2*, T2 and/or T relaxation times are often associated with meniscal damage/tears, anterior cruciate ligament (ACL) injury, and knee OA (6-10). Ligaments, tendons, and menisci have high concentrations of organized collagen fibers, a lower concentration of proteoglycan and less water (11) compared to other tissues, resulting in short T2* relaxation times. Short T2* relaxation times cause tissues to have little to no detectable signal with conventional magnetic resonance (MR) techniques, but imaging sequences with ultrashort echo times (UTE) have been used to quantify T2* relaxation time in ligaments, tendons, and menisci (6,12-18). Therefore, UTE-type sequences are attractive candidates for detecting signal from tissues with short or ultrashort T2* relaxation times (13). Quantitatively assessing tissues with ultrashort T2* relaxation times offers the potential to identify imaging biomarkers that are associated with early knee OA (6).

Variation in UTE based T2* relaxation time introduced by clinically relevant imaging parameters and patient-related conditions require evaluation to determine the reliability and sensitivity needed to distinguish diseased from control tissues. Previous work has evaluated the reproducibility of UTE-T2* quantifications for articular cartilage (19), patellar tendon (PT) (20), and compared T2* to UTE-T2* relaxation times quantified in the meniscus (16). However, these studies have not evaluated the effect that some other clinically relevant parameters have on T2* quantifications, such as fat suppression and patient positioning. Tissues with short T2* relaxation times may be partially saturated by the fat suppression pulse, leading to a lower signal intensity at UTEs, and overestimation of the tissue’s T2* relaxation time (12,21). UTE scans can be performed with and without fat suppression, and an understanding of the effect that fat suppression has on T2* relaxation time quantifications would help comparisons between studies in the literature. Patient-related conditions, such as the positioning of the knee with respect to the magnetic field, may also have an effect on T2* quantifications. Strong dipolar interactions in collagen-rich tissues are subject to the magic angle effect, which can contribute to considerable overestimation of T2* relaxation times (22-24).

The goals of this study were to evaluate (I) the repeatability of T2* relaxation time measured by a UTE research application sequence, and evaluate (II) the effect of fat suppression and (III) knee position on T2* relaxation time quantification. The repeatability of UTE based T2* relaxation time mapping was evaluated against a conventional gradient echo (GRE) sequence using scan-rescan images from standard gadolinium (Gd) phantoms and in vivo subjects. Effects of fat suppression on quantitative results were evaluated in phantoms and an ex-vivo pig knee specimen. The effects of knee position were evaluated using UTE-T2* and conventional GRE-T2* knee tissue relaxation times using in-vivo imaging of human subjects.


Methods

Pulse sequence

We utilized a dual-echo, three-dimensional non-selective, radial center-out UTE research application sequence on a clinical 3T scanner throughout this study. The 3D radial UTE research application sequence consisted of a short non-selective rectangular radio frequency (RF) pulse followed by a 20 µs transmit/receive switch time and a 100% asymmetric (half spokes) FID acquisition starting at the k-space center. To achieve an ultrashort TE, data acquisition started during ramp-up of the readout gradient. K-space was sampled using a 3D radial center-out trajectory with a koosh ball like distribution of spokes (Figure 1).

Figure 1 The sampling trajectory and sequence diagram for the 3D radial dual-echo UTE sequence. (A) A visualization of a 3D radial sampling trajectory; (B) the sequence diagram of the 3D radial dual-echo UTE sequence. RF, radio frequency; TE, echo time; ADC, analog to digital converter; 3D, three-dimensional; UTE, ultra-short echo time.

This 3D radial UTE prototype sequence can provide either single-echo or dual-echo acquisition. After the RF excitation pulse, the first echo was acquired from the k-space center to the surface of a sphere (inside-out readout) with UTE. A second echo can be acquired with either inside-out or outside-in trajectory corresponding to the polarity (monopolar or bipolar) of the second readout gradient. All dual-echo UTE scans were performed with monopolar readout; therefore, an additional rewinder gradient was used after the first read out gradient (Figure 1). Image reconstruction was based on a conventional non-uniform fast Fourier transform (NUFFT) by Cartesian gridding using a Kaiser-Bessel window function. To reduce trajectory deviations due to gradient non-linearity, axis-specific gradient delay correction was used to during reconstruction.

Phantom, ex-vivo and in-vivo image acquisition and processing

Phantom, ex-vivo and in-vivo experiments were carried out for this study. All data were acquired without pre-scan normalization, which is a correction method that impacts image intensity uniformity. Acquiring images without pre-scan normalization avoids variations in signal intensity scaling between acquisitions and facilitates interleaving of multiple acquisitions with different echo times (TE). Manual frequency, transmit adjustment, and 3D shimming were performed before each test with a manually selected shim volume. Scans were performed on a 3T scanner (MAGNETOM Prisma, Siemens Healthcare, Erlangen, Germany) which as has a maximum gradient amplitude of 80 mT/m, and a slew rate of 200 T/m/s. All phantom and in-vivo experiments used a knee coil (1Tx/15Rx, QED), and the ex-vivo experiments used a flexible coil (4Rx). Multi-echo data were aligned with increasing TEs and voxel-wise T2* relaxation time was determined by using mono-exponential least square fitting.

Phantom experiment

Two Gd phantoms with 15 and 30 mM concentrations were prepared and three sequences were utilized: (I) single-echo UTE, (II) dual-echo UTE, and (III) multi-echo GRE (25,26) (Table 1). To ensure that single- and dual-echo UTE sequences yielded similar signal for common TEs, “signal ratio” maps were generated, which divided echo images from the single-echo sequence by the corresponding echo-image from the dual-echo sequence. The mean signal ratio was calculated across a representative slice approximately perpendicular to the phantom’s length. Regions of interest (ROI) for each phantom were generated from a representative axial, sagittal, and coronal slice with an automatic regional grow algorithm that was initialized with a manually defined seed point within each slice. Mean and standard deviation (SD) of T2* relaxation times within each ROI were calculated.

Table 1

Sequence parameters of UTE and GRE imaging for Gd phantom, ex-vivo specimen and in-vivo patients

Study type Sequence
Single-echo UTE/DESS Dual-echo UTE Multi-echo GRE
Gd phantom Single-echo UTE
   Scan time (min:s) 8:17 (per echo time) 8:17 (per acquisition for two echoes) 13:39
   FOV (mm3) 130×130×130 130×130×130 130×130×128
   Matrix size (freq × phase × slice) 240×240×240 240×240×240 256×256×128
   Resolution (mm2) 0.542×0.542 0.542×0.542 0.508×0.508
   Slice thickness (mm) 0.542 0.542 1.000
   TR (ms) 24.9 24.9 25
   TE (ms) 0.06, 2, 4.92, 7.5, 8.62, 10, 19.5 0.06/7.5, 2/8.62, 4.92/10, 7.5/19.5 4.92, 8.61, 12.80, 20.00
   Flip angle (degrees) 6 6 6
   BW (Hz/pixel) 465 465 455
   Radial views 20,000 20,000
   Fat suppression Off Off/on (spokes: 5, 10, 15, and 20) Off
Ex-vivo/in-vivo DESS
   Scan time (min:s) 5:50 10:09 per acquisition × 2 9:13
   FOV (mm3) 140×140×112 160×160×160 160×160×120
   Matrix size (freq × phase × slice) 384×384×120 (ex-vivo);
384×384×160 (in-vivo)
240×240×240 256×256×120
   Resolution (mm2) 0.365×0.365 0.667×0.667 0.625×0.625
   Slice thickness (mm) 0.700 0.667 1.000
   TR (ms) 17.55 12.9 29
   TE (ms) 6.02 0.06/4.92, 2/8 2.48, 6.86, 11.24, 15.62, 20, 24.38
   Flip angle (degrees) 25 6 12
   BW (Hz/pixel) 185 465 500
   Radial views 45,000
   Fat suppression On Ex-vivo: off/on (spokes: 5, 10, 15, and 20);
in-vivo: on, 20 spokes
On

Gd, gadolinium; UTE, ultra-short echo time; DESS, dual echo steady state; GRE, gradient echo; FOV, field of view; TR, repetition time; TE, echo time; BW, bandwidth.

The phantoms were also used to evaluate the effect of fat suppression on UTE-T2* relaxation time quantification. Dual-echo UTE acquisitions without fat suppression and with different number of radial spokes (5, 10, 15, and 20) per fat suppression pre-pulse were acquired in both Gd phantoms. All fat suppressed acquisitions used a spectrally selective fat saturation pulse.

Ex-vivo experiment

The ex-vivo experiment utilized one secondary use pig hind limb. The hind limb was disarticulated at the hip, leaving the knee joint capsule and surrounding soft tissue undisturbed, then stored at −20 ℃ until it was thawed and brought to room temperature over a 36-hour period prior to imaging. The ex-vivo sample remained unfixed throughout the experiment. The ex-vivo limb was used to evaluate the effects of fat suppression on UTE-T2* relaxation time quantification. Similar to the phantom experiment, all acquisitions utilized a dual-echo UTE sequence without fat suppression and with different number of radial spokes (5, 10, 15, and 20) per fat suppression pre-pulse.

In addition to the UTE sequence, dual-echo steady state (DESS) and multi-echo GRE sequences (Table 1) were acquired. The DESS images were used to segment anatomical structures. Three adjacent representative sagittal slices near the mid-substance of the ACL, posterior cruciate ligament (PCL), PT and the medial and lateral meniscus (MEN) were manually segmented. The DESS image was rigidly registered to the first echo of the UTE and GRE images. The estimated registration parameters from the DESS to the first UTE echo were applied to the four tissue segmentations to align the corresponding ROI in the UTE and GRE images (27). Mean and SD UTE-T2* and GRE-T2* relaxation time within each ROI for both Gd phantoms and ex-vivo knee tissue were calculated for the UTE and GRE images, respectively.

In-vivo experiment

Five healthy volunteers (2 males and 3 females) took part in the in-vivo study. This study was conducted in accordance with the Declaration of Helsinki (as revised in 2013) and approved by the Institutional Review Board of the Cleveland Clinic, written informed consent was obtained from the participants prior to human subject experiments. Subjects did not have reported knee pain, a history of knee injury, or inflammatory disease. Each volunteer was imaged with their knee in an extended position then imaged again with their knee flexed within the knee coil to assess the effects of knee position on T2* relaxation time. For each knee position, dual-echo UTE, multi-echo GRE, and DESS images were collected (Table 1).

To evaluate T2* repeatability, subjects were rescanned using the UTE (n=4) and GRE (n=3) sequences. Rescan images were collected within the same session as the initial images but after subjects had exited and re-entered the scanner. For each knee position, all UTE and GRE image data were rigidly registered to the first echo of the GRE image (17). Representative slices of four tissues (PT, ACL, PCL, MEN) were manually segmented on the GRE images in both the extended and flexed knee position (8 segmentations total for each volunteer). For each tissue, three sagittal slices were segmented near the midsection of the ligaments and tendon, and the body of the MEN. To ensure consistent ROIs between scan and rescan images, the rescan image data were also rigidly registered to the first echo of the original scan’s GRE image. Each tissue’s segmentation was manually inspected in the rescanned images, and if the mask was misaligned, then new segmentations were generated using the registered rescan image. Mean and SD of the T2* relaxation time was calculated in each ROI. To avoid fitting to echoes with low signal to noise ratio (SNR), the T2* relaxation time for each tissue was recalculated with the longest echo excluded if the average mean T2* value across subjects (either in extended or flexed positions) was less than half the longest echoes’ TE (Table 2).

Table 2

The echoes that were excluded from T2* relaxation time fitting

Sequence ACL PCL PT MEN
UTE (ms) None None 8.00 None
GRE (ms) None 24.38 15.62, 20.00, 24.38 20.00, 24.38

ACL, anterior cruciate ligament; PCL, posterior cruciate ligament; PT, patellar tendon; MEN, meniscus; UTE, ultra-short echo time; GRE, gradient echo.

The knee position in extended and flexed positions was quantified using the DESS images. A semi-automated approach was utilized to define ROIs for the femur and tibia bones in the extended and flexed knee positions, and surfaces were generated from the segmentations. An automated approach used the bone surfaces to define the fixed femoral and tibial coordinate systems (28), and the coordinate systems were used to determine the joint kinematics for each position (29).

Statistical analysis

The phantom and in-vivo studies were used to evaluate the repeatability of the UTE-T2* relaxation time. The percent difference between each initial and repeated scan for the phantom and in-vivo images was calculated to evaluate the repeatability of mean T2* relaxation time for the UTE and GRE sequences (Table 3). The percent difference was calculated for each subject’s ROI, then averaged across all subjects. Additionally, a Bland-Altman analysis was used to evaluate the scan-rescan repeatability of T2* relaxation time, where the limits of agreement were determined using the SD of the scan-rescan difference from the 95% confidence intervals of the t-distribution. The percent difference and intraclass correlation coefficient (ICC) between imaging sequences was calculated to evaluate the agreement between T2* relaxation time measures. All of the percent differences were calculated as the absolute difference between two values divided by the mean of the two values, all multiplied by 100. ICC was calculated using R Statistical Software (V4.1.3; R Core Team) using the irr package [V0.84.1; Gamer et al. (30)] with a two-way random model and type of absolute agreement. An ICC value above 0.90 indicates excellent agreement while values below 0.50 indicates poor repeatability (31). Additionally, the root mean square deviation (RMSD) in mean T2* relaxation times between initial and repeated scans across subjects (Table 3) was calculated.

Table 3

An overview of the comparisons and statistical measures used for each study

Study Comparison Statistical measure
Phantom Scan vs. rescan % Diff, ICC, Bland-Altman
UTE vs. GRE ICC
Fat suppression CV, ICC
Ex vivo Fat suppression CV, ICC
In vivo Scan vs. rescan % Diff, ICC, RMSD, Bland-Altman
UTE vs. GRE % Diff
Extension vs. flexion % Diff, ICC, RMSD

% Diff, percent difference; ICC, intraclass correlation coefficient; CV, coefficient of variation; RMSD, root mean square deviation; UTE, ultra-short echo time; GRE, gradient echo.

The effect of fat suppression on T2* relaxation time quantification was evaluated using the phantom and ex-vivo images. The amount of variation introduced by fat suppression was evaluated by calculating the coefficient of variation (CV) across all levels of fat suppression (number of radial spokes per fat saturation pulse) for each ROI in the phantom and ex-vivo images. The ICC across non-fat suppressed and all fat suppressed images was calculated to evaluate the agreement between mean T2* relaxation times (Table 3).

The reproducibility of T2* relaxation time quantification for the UTE and GRE sequences was evaluated using the in vivo images in the extended and flexed knee position. The percent difference in mean T2* values between knee positions was calculated for each ROI and averaged across subjects. Additionally, the RMSD for mean T2* relaxation times between extended and flexed knee positions across subjects was calculated (Table 3). The agreement between calculated T2* relaxation times using data acquired in the extended and flexed position was also evaluated by calculating ICC for each sequence.


Results

Images of both Gd phantoms had homogeneous signal distribution with no observable artifacts (Figure 2A,2B). The minimum mean coefficient of determination (R2) (±SD) of the monoexponential fit across both phantoms and across the single and dual echo UTE and GRE sequences was 0.98 (±0.06). Within the phantom’s ROI, the mean signal ratio between the single- and dual-echo acquisitions showed values above 1.00, and increased as the TE increased (Figure 2C,2D). T2* relaxation time maps calculated from the single and dual-echo UTE sequences showed similar variations, where the average SD across slices was 0.66 and 0.64 ms, respectively.

Figure 2 Signal intensity signal ratio maps from the phantom study. The single-echo and dual-echo UTE images of (A) 15 mM and (B) 30 mM Gd phantoms across the TEs. Corresponding signal ratio maps for (C) 15 mM and (D) 30 mM phantom between UTE echoes with same TE, where the inset shows the mean ± SD signal ratio within the ROI. UTE, ultra-short echo time; Gd, gadolinium; TE, echo time; SD, standard deviation; ROI, region of interest.

The average mean T2* relaxation times across the imaged planes for the single-echo UTE, dual-echo UTE and the multi-echo GRE images was 11.85, 11.25, 11.31 ms for the 15 mM Gd phantom, and 5.76, 5.52, and 5.59 ms for the 30 mM Gd phantom, respectively (Table 4). All of the sequence’s percent difference in mean T2* relaxation time between scan-rescan images was less than 8%, and the Bland-Altman analysis showed a mean difference less than 0.25 ms (Figure 3). The inter-sequence percent difference values were less than 3.5%, and inter-sequence ICC showed excellent agreement between estimated T2* relaxation times (Table 4).

Table 4

The T2* relaxation time of Gd phantoms using single-echo UTE, dual-echo UTE and multi-echo GRE without fat suppression, and the inter-sequence CV and ICC

Sequence 15 mM Gd phantom 30 mM Gd phantom
Axial Coronal Sagittal Axial Coronal Sagittal
Single-echo UTE, ms
   First scan 11.88±0.58 11.98±0.90 11.67±1.41 5.83±0.13 5.78±0.33 5.69±0.53
   Second scan 11.76±0.61 11.64±1.00 11.79±1.29 6.14±0.28 6.07±0.36 6.06±0.57
   % Diff 1.04 2.88 0.96 5.21 4.98 6.44
Dual-echo UTE, ms
   First scan 11.32±0.47 11.37±0.69 11.06±1.34 5.59±0.12 5.53±0.33 5.44±0.52
   Second scan 11.48±0.62 11.35±0.99 11.49±1.29 5.90±0.33 5.77±0.37 5.74±0.64
   % Diff 1.38 0.20 3.81 5.33 4.33 5.34
Multi-echo GRE, ms
   First scan 11.35±1.20 11.33±1.31 11.23±1.52 5.65±0.52 5.58±0.65 5.55±0.76
   Second scan 11.90±0.80 11.84±1.00 11.68±1.32 6.01±1.01 6.04±1.19 5.98±1.02
   % Diff 4.79 4.35 3.96 6.27 7.97 7.46
Inter-sequence
   CV 2.75% 3.12% 2.82% 2.20% 2.35% 2.22%
   ICC 0.993 (0.893–0.999)

The inter-sequence CV and ICC values were calculating across the single-, dual-echo UTE, and the GRE T2* values. Data are presented as the mean ± standard deviation, % Diff, CV and the ICC with 95% CIs. Gd, gadolinium; UTE, ultra-short echo time; GRE, gradient echo; CV, coefficient of variation; ICC, intraclass correlation coefficient; % Diff, percent difference; CI, confidence interval.

Figure 3 Bland-Altman plots showing the difference vs. average T2* relaxation time between scan and rescan images from phantom images acquired using single and dual echo UTE sequences for different phantom ROIs. The solid line shows the mean difference between scan and rescan T2* relaxation times, and the dashed lines show the limits of agreement. UTE, ultra-short echo time; SD, standard deviation; ROI, region of interest.

The ex-vivo UTE images showed that the ACL and PT had rapidly decaying signals between 0.06 and 8.00 ms (Figure 4). The minimum mean R2 value of the monoexponential fit across all of the ex vivo images was 0.98 and 0.93 for the UTE and GRE sequences, respectively. Mean UTE-T2* relaxation time showed little variation between scans with fat suppression and scans with different numbers of radial spokes after fat suppression (Table 5). The CV between scans was less than 5% for both phantoms and knee tissues, however, the tissues showed the shortest and longest UTE-T2* relaxation time in the scan without fat suppression and with 5 spokes after fat suppression, respectively (Table 5). The largest difference in mean UTE-T2* relaxation time between scans with and without fat suppression was less than 1.5 ms. The mean UTE-T2* relaxation times calculated from the ex-vivo images were shorter than the GRE-T2* relaxation times for each evaluated tissue, with the largest difference being nearly 8 ms (Table 5).

Figure 4 Representative slices from the ex-vivo pig knee UTE and GRE images with 20 radial spokes after fat suppression preparation showing the four and six echoes, respectively. UTE, ultra-short echo time; GRE, gradient echo.

Table 5

The GRE-T2* and dual-echo UTE-T2* relaxation times for the ex-vivo specimen and phantoms, and the UTE-T2* CV and ICC for Gd phantoms and each tissue in the ex-vivo specimen without fat suppression and with different numbers of radial spokes after fat suppression

Sequence 15 mM Gd 30 mM Gd ACL PCL PT MEN
GRE-T2* (ms) 16.14±6.58 21.54±8.49 9.00±2.69 11.65±4.92
UTE-T2* (ms)
   None 11.31±0.20 5.59±0.013 9.80±3.15 12.69±2.76 4.18±0.56 8.12±1.90
   Spokes # 5 11.31±0.19 5.76±0.029 10.94±3.80 14.11±2.98 4.51±0.95 8.30±2.06
   Spokes # 10 11.22±0.18 5.70±0.032 10.69±3.59 13.91±3.06 4.33±0.91 8.27±1.96
   Spokes # 15 11.16±0.20 5.68±0.033 10.64±3.63 13.67±2.88 4.23±0.85 8.28±1.99
   Spokes # 20 11.14±0.18 5.65±0.031 10.44±3.73 13.61±3.14 4.20±0.85 8.19±2.05
Overall CV (UTE-T2*) 0.72% 1.10% 4.10% 4.01% 3.17% 0.91%
Fat suppressed CV (UTE-T2*) 0.68% 0.82% 1.93% 1.66% 3.24% 0.58%
Overall ICC (UTE-T2*) 0.993 (0.975–0.999)

Overall CV and ICC values were calculated across all of the images. The fat suppressed CV values were calculated across only the fat suppressed images. Data are presented as mean ± standard deviation, CV, and the ICC with 95% confidence intervals. GRE, gradient echo; UTE, ultra-short echo time; CV, coefficient of variation; ICC, intraclass correlation coefficient; Gd, gadolinium; ACL, anterior cruciate ligament; PCL, posterior cruciate ligament; PT, patellar tendon; MEN, meniscus.

The in-vivo UTE images had shorter mean T2* relaxation times compared to the corresponding tissues in the GRE images (Figure 5, Table 6). The average mean R2 (±SD) of the monoexponential fit across subjects was greater than 0.95 (±0.02) for all tissues for both UTE and GRE sequences. For repeated scans, the UTE and GRE sequences had percent differences and RMSD less than 8% and 0.6 ms, respectively (Table 7). Similarly, the Bland-Altman analysis showed a mean difference in T2* relaxation time between scan and rescan images less than 0.2 ms for both UTE and GRE sequences (Figure 6). Additionally, the UTE and GRE sequences had scan/rescan ICC values greater than 0.98 (Table 7).

Figure 5 Representative slices of the first echo of one subject’s extended and flexed UTE and GRE images with an overlay of the T2* relaxation time map for each tissue. UTE, ultra-short echo time; GRE, gradient echo; ACL, anterior cruciate ligament; PCL, posterior cruciate ligament; PT, patellar tendon; MEN, meniscus.

Table 6

In vivo UTE- and GRE-T2* relaxation time for each tissue in the extended and flexed knee position for all subjects, the ICC between extended and flexed positions for the UTE and GRE images, and the % Diff of T2* values between the UTE and GRE sequences

Sequence ACL PCL PT MEN
UTE-T2* (ms)
   Extended knee 11.91±1.64 7.52±0.68 2.87±0.66 7.44±0.30
   Flexed knee 8.48±1.10 9.03±0.69 6.06±2.69 7.64±0.63
   ICC 0.511 (0.089–0.775)
GRE-T2* (ms)
   Extended knee 20.09±2.17 10.82±1.13 7.22±1.78 8.87±0.39
   Flexed knee 15.04±2.12 12.04±0.88 6.17±1.01 8.88±0.77
   ICC 0.769 (0.501–0.902)
UTE vs. GRE (% Diff)
   Extended knee 51.45±6.05 35.84±6.76 83.05±31.15 17.46±6.27
   Flexed knee 55.73±3.92 28.55±2.78 25.70±18.98 14.91±3.72

Data are presented as the mean ± standard deviation and the ICC with the 95% confidence interval. UTE, ultra-short echo time; GRE, gradient echo; % Diff, percent difference; ICC, intraclass correlation coefficient; ACL, anterior cruciate ligament; PCL, posterior cruciate ligament; PT, patellar tendon; MEN, meniscus.

Table 7

The RMSD, % Diff, and ICC between T2* relaxation times calculated using extended and flexed knee images and scan and rescan images

Sequence ACL PCL PT MEN
UTE-T2*
   Extend/flex (n=5)
    RMSD (ms) 3.93 1.87 4.31 0.76
    % Diff 33.17±17.66 18.28±12.96 63.23±38.65 8.26±5.33
   Scan/rescan (n=4)
    RMSD (ms) 0.24 0.34 0.39 0.54
    % Diff 1.89±1.65 3.26±2.30 7.29±7.09 6.67±3.05
   ICC 0.985 (0.958–0.995)
GRE-T2*
   Extend/flex (n=5)
    RMSD (ms) 5.66 1.64 2.22 0.46
    % Diff 28.86±14.41 12.84±6.04 22.47±18.39 4.87±2.17
   Scan/rescan (n=3)
    RMSD (ms) 0.22 0.26 0.32 0.48
    % Diff 1.05±0.88 1.98±1.46 4.91±2.38 4.80±2.14
   ICC 0.997 (0.988–0.999)

Data are presented as the mean ± standard deviation and the ICC with the 95% confidence interval. RMSD, root mean square deviation; % Diff, percent difference; ICC, intraclass correlation coefficient; ACL, anterior cruciate ligament; PCL, posterior cruciate ligament; PT, patellar tendon; MEN, meniscus; UTE, ultra-short echo time; GRE, gradient echo.

Figure 6 Bland-Altman plots showing the difference vs. average T2* relaxation time between scan and rescan images from in-vivo images acquired using the dual-echo UTE and multi-echo GRE sequences for different tissue ROIs. The solid line shows the mean difference between scan and rescan T2* relaxation time values, and the dashed lines show the limits of agreement. UTE, ultra-short echo time; GRE, gradient echo; ACL, anterior cruciate ligament; PCL, posterior cruciate ligament; PT, patellar tendon; MEN, meniscus; SD, standard deviation; ROIs, regions of interest.

The effect of knee position on the quantified T2* relaxation times varied between tissues. Between the extended and flexed positions, subjects showed a mean ± SD change in flexion angle of 4.6°±3.2°. Overall, there was poor agreement between T2* relaxation times determined from extended and flexed images, with ICC values of 0.51 and 0.77 for the UTE and GRE sequences, respectively (Table 6). The UTE and GRE sequences showed the PT and ACL as having the highest RMSD in T2* relaxation time between extended and flexed knee positions, respectively (Table 7). Both sequences showed the meniscus as having smallest change in T2* relaxation times between knee positions, with RMSD and percent difference values less than 1.0 ms and 10%, respectively (Table 7).


Discussion

In this work, we presented and evaluated a 3D radial UTE prototype sequence to quantify T2* relaxation time and tested its repeatability, the effect of fat suppression, and knee position for whole knee imaging against corresponding measures obtained from a more conventional GRE T2* sequence. Previous studies have used other UTE sequences to evaluate the repeatability and reproducibility of UTE-T2* relaxation time quantified for knee imaging (19,20,32), and evaluated the effects of fat suppression on UTE-T2* quantification (21,33). This current study utilizes a prototype sequence to quantify the variation in UTE-T2* relaxation time introduced by clinically relevant factors such as knee positioning, and the quantified variations can be used to help identify the sensitivity needed to distinguish diseased from control tissues. In phantom scans with different Gd concentrations, low percent difference values indicate that both single-echo and dual-echo UTE sequences have excellent repeatability of T2* relaxation times as well as high agreement with the conventional GRE sequence (25,26). The agreement in UTE-T2* relaxation time between dual-echo UTE images acquired with and without fat suppression for the phantom and ex-vivo scans indicates that UTE-T2* relaxation time is not sensitive to fat suppression. For in vivo human knees, both UTE and GRE T2* relaxation time was repeatable, but showed variations between extended and flexed positions, indicating that orientation will have an effect on T2* relaxation time quantifications.

The results from the phantoms show that quantification of the T2* relaxation time is repeatable between scanning sessions, although there was some variation between phantoms. The percent difference values for 30 mM phantom were higher than the 15 mM Gd values across sequences. One potential reason for the observed differences could be shorter T2* relaxation time and rapidly decaying signal in the 30 mM phantom (Figure 2) causing later echoes to be more affected by noise and introducing variation in T2* quantifications. The phantom images from the GRE sequence generally had higher percent difference for mean T2* relaxation time compared to the UTE sequence for both phantoms (Table 4), which may be because the GRE sequence has a relatively long TE for the first echo, leading to lower SNR in the first TE image compared with the UTE sequence (19). In general, both UTE and GRE T2* repeatability are sensitive to image SNR, and efforts should be made to increase SNR and minimize the noise-induced variations to provide better quantitative reproducibility.

Fat suppression and the number of radial spokes used after fat suppression had little effect on UTE-T2* relaxation times in phantoms and tissue, as indicated by the low CVs between results with and without fat suppression, which are further supported by the high ICC value (0.99) indicating excellent agreement (Table 5). It was observed that the ex vivo tissue’s UTE-T2* relaxation times with fat suppression were slightly longer compared to those without fat suppression (Table 5). One potential reason for this difference could be that fat suppression has little effect on the homogeneous phantom with T2* >5 ms (for both phantoms), but the ultra-short T2* (<5 ms) components in the tissues may be affected by fat suppression. Short T2* tissues have a broader spectral bandwidth which can overlap with the frequency band of the fat saturation pulse, and signals in the ultra-short T2* component tissues could therefore also be partially saturated, leading to a lower signal intensity at UTE. A relatively long duration fat suppression pulse with narrower bandwidth could reduce signal attenuation of short T2* tissues but would potentially decrease the quality of fat saturation (21).

In vivo UTE-T2* relaxation times of ligament, tendon, and menisci obtained from our sequence were generally consistent with the literature where similar sequences were implemented. The present ACL UTE-T2* relaxation time was 11.9 ms, which is similar to that reported from in vitro (11.3 ms) (18), but shorter than has been reported in vivo (~16 ms) (15,17). This current study’s meniscus UTE-T2* relaxation time (7.4 ms) was near the lower range of values previously reported for the anterior and posterior meniscus regions (8.5–11.7 ms) (6,16,17). The difference between our results and those previously reported could stem from regional differences within the menisci, where the current study evaluated the meniscal body (Figure 5) rather than the anterior or posterior meniscal horns. The reported PT UTE-T2* relaxation time (2.9 ms) fell within the range that has been reported for healthy subjects (2.0–5.7 ms) (14,17), and the current study’s PCL UTE-T2* relaxation time (7.5 ms) was similar to previously reported (8.8 ms) for in-vivo subjects (17), and shorter than has been reported for ex-vivo specimens (11.1 ms) (34).

T2* relaxation times quantified from the phantoms showed excellent agreement between UTE and GRE sequences (ICC =0.99, Table 4), however, the values quantified from knee tissues showed poor agreement between sequences, with average percent differences ranging between 15–85% (Table 6). One potential reason for this difference could be that knee tissues are characterized by short and long T2* components (35), and the UTE sequence detects short T2* components which are not well captured by the conventional GRE sequence (36). The additional signal from the ultrashort echo could result in different T2* relaxation time quantifications between UTE and GRE sequences. The phantoms may not show the same variation between sequences because their signal decay may be characterized by a single component, resulting in similar T2* relaxation times between UTE and GRE sequences. Implementing bi-exponential fitting in both UTE- and GRE-derived images may resolve these in vivo sequence-specific differences and could be explored in future work. Additionally, the difference in T2* relaxation time between the UTE and GRE sequences could be due to the ex-vivo and in-vivo UTE sequence parameters having a longest echo that is one third of the longest echo in the GRE sequence (Table 1). Adding longer echoes to the UTE sequence that are comparable to the GRE sequence would provide a more direct comparison, however it would also prohibitively increase the scan time.

The UTE and GRE sequences demonstrated repeatability in vivo, however, knee position introduced variability into T2* relaxation time quantifications for the evaluated ligaments and tendon. Both sequences showed ICC values greater than 0.98 (Table 7) between in vivo scan-rescan images, demonstrating excellent agreement. The meniscus had a consistently low RMSD between T2* values quantified from extended and flexed knee positions. Chu et al. (6) showed significant differences of 2.7 and 5.0 ms in meniscal UTE-T2* relaxation time between uninjured controls and preoperative ACL tear patients with uninjured and injured menisci, respectively. This current study showed that the RMSD in meniscus UTE-T2* relaxation for repeated scans and different knee positions was less than 1 ms (Table 7), which suggests that the evaluated UTE sequence would be sensitive enough to detect clinically relevant changes in meniscus T2* relaxation times. The same group (15) also showed a significant 2 ms change in mean ACL graft UTE-T2* relaxation time between 1 and 2 years post-operatively, which is less than this current study’s reported RMSD of 4 ms between knee positions, but markedly greater than the RMSD of 0.24 ms reported between repeated scans (Table 7). The RMSD in ACL UTE-T2* values between repeated scans and knee positions indicates that the applied UTE sequence can be sensitive enough to evaluate ACL graft maturation in vivo, however, the reproducibility of ACL UTE-T2* quantifications is impacted by knee position reproducibility.

The sensitivity of T2* relaxation time to knee position can originate from multiple sources. One explanation could be the magic angle effect, which causes increasing overestimation of T2* relaxation time as the orientation of the tissue’s organized collagen approaches 54° relative to the static B0 field (22-24). The anatomic orientation of the ACL, PCL and PT may make these tissues more susceptible to the magic angle effect in the evaluated knee positions, resulting in variation of T2* relaxation time quantification between extended and flexed positions. Conversely, the meniscus is likely less affected by the magic angle effect because of its anatomic orientation in the evaluated joint positions. Changes in ligament and tendon tensioning between knee positions could be another source of variation in mean T2* values between knee positions, where T2* relaxation time may change as ligament tensioning changes between extended and flexed positions (37-39).

There are several limitations for our study worth noting. First, the sample size for this study was small, and including additional subjects would enhance the robustness of our findings. Additionally, only two knee positions were considered when evaluating the effect that knee position has on T2* relaxation time quantifications. The results show that UTE and GRE T2* quantifications can change due to knee position, however, a more systematic approach with multiple knee positions would be needed to characterize the orientation dependence of T2* relaxation time. A more systematic approach could also evaluate changes in joint rotations aside from flexion, such as varus and internal tibial rotation to account for potential coupled kinematics. As suggested earlier, the use of a mono-exponential fitting function to determine T2* relaxation times could introduce bias to the tissue’s UTE- and GRE-T2* relaxation time calculations and implementing a bi-exponential fitting function as others have done (35,40) may reduce this sequence-specific bias. Further to this point, separating short and long T2* components could provide additional sensitivity to detect clinically meaningful tissue remodeling processes and is of interest in future work developing these sequences.


Conclusions

In summary, we showed that the 3D radial UTE sequence can be used to repeatably quantify T2* relaxation time for knee ligaments, tendons, and menisci. The meniscus showed little variation in UTE-T2* values between evaluated knee positions, suggesting that the presented UTE sequence can yield reproducible T2* quantifications. The scan-rescan repeatability of the ACL UTE-T2* values indicates that the presented sequence may be used to detect clinically relevant changes in mean T2* relaxation time, however, reproducibility of these values is impacted by knee position consistency between scans.


Acknowledgments

Funding: This study was partially supported by NIH/NIBIBU01EB023829 (PIs: Xiaoliang Zhang and Xiaojuan Li), NIH/NIAMSR00-AR069004 (PI: Jillian E. Beveridge), NIHT32AR007505 (Awardee: William Zaylor), and the Cleveland Clinic Musculoskeletal Research Center (001-IF102433, PI: Jillian E. Beveridge).


Footnote

Conflicts of Interest: All authors have completed the ICMJE uniform disclosure form (available at https://qims.amegroups.com/article/view/10.21037/qims-23-459/coif). Kecheng Liu is employed by Siemens Medical Solutions USA, Inc., Malvern. Xiaodong Zhong was an employee of Medical Solutions USA, Inc. in Los Angeles until June 30, 2023. Stefan Sommer is employed by Siemens Healthineers International AG, Switzerland. Jillian E. Beveridge and William Zaylor received partial salary support from NIH/NIAMS R00-AR069094, and William Zaylor also received salary support from NIH T32AR007505. Xiaojuan Li and Xiaoliang Zhang received partial salary support from the grant NIH/NIBIB U01EB023829, and the same grant partially supported the work presented in this study. The other authors have no conflicts of interest to declare.

Ethical Statement: The authors are accountable for all aspects of the work in ensuring that questions related to the accuracy or integrity of any part of the work are appropriately investigated and resolved. This study was conducted in accordance with the Declaration of Helsinki (as revised in 2013) and approved by the Institutional Review Board of the Cleveland Clinic, written informed consent was obtained from the participants prior to human subject experiments.

Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/.


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Cite this article as: Wu Z, Zaylor W, Sommer S, Xie D, Zhong X, Liu K, Kim J, Beveridge JE, Zhang X, Li X. Assessment of ultrashort echo time (UTE) T2* mapping at 3T for the whole knee: repeatability, the effects of fat suppression, and knee position. Quant Imaging Med Surg 2023;13(12):7893-7909. doi: 10.21037/qims-23-459

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